BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020D01LP1|AL427607
(1020 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1137 834 0.0
>3x_Contig1137
Length = 5865
Score = 834 bits (420), Expect = 0.0
Identities = 541/578 (93%), Gaps = 3/578 (0%)
Strand = Plus / Plus
Query: 430 aaagacttcaatcttgcgatgatactatagaaacctttttgcgtatcttcaaaacatacc 489
|||||| |||||| ||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 4323 aaagacgtcaatcgtgcgatgatactatagaaaccgttttgcgtatcgtcaaaacatacc 4382
Query: 490 gggttcttcttaatccaaagcgtctctaatttagggaaaaccgtatttatactgtctatt 549
||| | || || |||||||||||| || |||||||||||| | | || | | ||
Sbjct: 4383 gggggcggctgaagccaaagcgtctcgaaggtagggaaaaccggagggagacgggcgatg 4442
Query: 550 tcctcccaacttgtgatcctatttctatcaatcctaagagtcatgatatgactgttggtg 609
||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 4443 tcctcccaactggtgatcctaggtctatcaatcctaagagtcaggatatgactgttggtg 4502
Query: 610 ttgagatcgttaaggtctgatattttgttttctgaaatgtcaatgctagttaaggatgat 669
|||||||||||||||||||| || |||| |||||||||||||||||||||||||||||
Sbjct: 4503 ttgagatcgttaaggtctgagatggtgttggctgaaatgtcaatgctagttaaggatgat 4562
Query: 670 tcttttgaaagaacttttgggaagccaatgaaaaggttatcagatatgttgatttcctgt 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4563 tcttttgaaagaacttttgggaagccaatgaaaaggttatcagatatgttgatttcctgt 4622
Query: 730 aatgaggttaaaacatctggaagttttgatagcaagtttgaagaaatgtctagcgccttt 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4623 aatgaggttaaaacatctggaagttttgatagcaagtttgaagaaatgtctagcgccttt 4682
Query: 790 atttgagggaaagcctctattattgtctctatatctccatttcggagcttacaacatgcc 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4683 atttgagggaaagcctctattattgtctctatatctccatttcggagcttacaacatgcc 4742
Query: 850 attgatagttctttgacattggaaaattcaaactgttcactggaatccgcttctaacttc 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4743 attgatagttctttgacattggaaaattcaaactgttcactggaatccgcttctaacttc 4802
Query: 910 gtg-aamagttcccactcaatataacagtctcgacagatggaaatagtcgc-gtatgggt 967
||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 4803 gtgaaacagttcccactcaatataacagtctcgacagatggaaatagtcgcagtatgcgg 4862
Query: 968 tacacctcatttatgtcag-aaacagattgaaggataa 1004
||||||||||||||||||| ||||||||||||||||||
Sbjct: 4863 tacacctcatttatgtcagaaaacagattgaaggataa 4900
Score = 741 bits (373), Expect = 0.0
Identities = 377/379 (99%)
Strand = Plus / Plus
Query: 1 aggtcttatttggacttgatgtatattgtwctctcttctatattataggttgctagggga 60
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 3894 aggtcttatttggacttgatgtatatagtactctcttctatattataggttgctagggga 3953
Query: 61 gagaattcattggtgaaatcgtgtttgatgttgtccatgacagagtattgcagggaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3954 gagaattcattggtgaaatcgtgtttgatgttgtccatgacagagtattgcagggaaatt 4013
Query: 121 tcgccttgtagattaaatttatatcgcagaaaggtcttcaaataacgcacactgaagctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4014 tcgccttgtagattaaatttatatcgcagaaaggtcttcaaataacgcacactgaagctt 4073
Query: 181 ttcaatagtttcaacttgataggttcagaatcataaactattggaatttcaatcagttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4074 ttcaatagtttcaacttgataggttcagaatcataaactattggaatttcaatcagttct 4133
Query: 241 tttgaaaggaaattcgtttgttggacggtggttctactttctgtgtttatgctgtgcttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4134 tttgaaaggaaattcgtttgttggacggtggttctactttctgtgtttatgctgtgcttc 4193
Query: 301 agtgtcaaatgattccacatagcactttgcgtatcataatttatctgagacgataaaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4194 agtgtcaaatgattccacatagcactttgcgtatcataatttatctgagacgataaaacc 4253
Query: 361 agcgatatgaaatagagtt 379
|||||||||||||||||||
Sbjct: 4254 agcgatatgaaatagagtt 4272
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8198
Number of Sequences: 1807
Number of extensions: 8198
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 1020
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1004
effective length of database: 10,329,639
effective search space: 10370957556
effective search space used: 10370957556
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)